Mehmet Volkan Atalay

E-mail

vatalay@metu.edu.tr

Department

Department of Computer Engineering

ORCID

0000-0001-7850-0601

Scopus Author ID

57198443748

Web of Science Researcher ID

M-2256-2016

Drug Repurposing Approach to Identify Candidate Drug Molecules for Hepatocellular Carcinoma Baser, Tugce; Rifaioğlu, Ahmet Süreyya; Atalay, Mehmet Volkan; Atalay, Rengül (2024-09-01) Hepatocellular carcinoma (HCC) is the most prevalent primary liver cancer, with a high mortality rate due to the limited therapeutic options. Systemic drug treatments improve the patient’s life expectancy by only a few mon...
Hybrid deep learning models with data fusion approach for electricity load forecasting Özen, Serkan; Yazıcı, Adnan; Atalay, Mehmet Volkan (2024-01-01) This study explores the application of deep learning in forecasting electricity consumption. Initially, we assess the performance of standard neural networks, such as convolutional neural networks (CNN) and long short-term...
Transfer learning for drug–target interaction prediction Dalkıran, Alperen; Atakan, Ahmet; Rifaioğlu, Ahmet Süreyya; Martin, Maria J; Çetin Atalay, Rengül; Acar, Aybar Can; Doğan, Tunca; Atalay, Mehmet Volkan (2023-06-01) MotivationUtilizing AI-driven approaches for drug–target interaction (DTI) prediction require large volumes of training data which are not available for the majority of target proteins. In this study, we investigate the us...
Power consumption forecasting by hybrid deep architectures with data fusion Özen, Serkan; Atalay, Mehmet Volkan (2023-01-01) Many of the deep learning solutions for time-series forecasting reported in the literature include complex neural networks that may not be directly employed by the practitioner in the field. In this study, we demonstrate h...
SLPred: a multi-view subcellular localization prediction tool for multi-location human proteins Özsarı, Gökhan; Rifaioglu, Ahmet Sureyya; Atakan, Ahmet; DOĞAN, TUNCA; Martin, Maria Jesus; Atalay, Rengul Cetin; Atalay, Mehmet Volkan (2022-09-01) Accurate prediction of the subcellular locations (SLs) of proteins is a critical topic in protein science. In this study, we present SLPred, an ensemble-based multi-view and multi-label protein subcellular localization pre...
Online embedding and clustering of evolving data streams Zubaroglu, Alaettin; Atalay, Mehmet Volkan (2022-07-01) Number of connected devices is steadily increasing and this trend is expected to continue in the near future. Connected devices continuously generate data streams and the data streams may often be high dimensional and cont...
Data Centric Molecular Analysis and Evaluation of Hepatocellular Carcinoma Therapeutics Using Machine Intelligence-Based Tools Cetin-Atalay, Rengul; Kahraman, Deniz Cansen; Sinoplu, Esra; RİFAİOĞLU, AHMET SÜREYYA; Atakan, Ahmet; Dönmez, Ataberk; Atas, Heval; Atalay, Mehmet Volkan; Acar, Aybar C.; DOĞAN, TUNCA (2021-12-01) Purpose Computational approaches have been used at different stages of drug development with the purpose of decreasing the time and cost of conventional experimental procedures. Lately, techniques mainly developed and appl...
Crowdsourced mapping of unexplored target space of kinase inhibitors Cichonska, Anna; et. al. (2021-06-01) Despite decades of intensive search for compounds that modulate the activity of particular protein targets, a large proportion of the human kinome remains as yet undrugged. Effective approaches are therefore required to ma...
MDeePred: Novel multi-channel protein featurization for deep learning-based binding affinity prediction in drug discovery Rifaioglu, A.S.; Atalay, R. Cetin; Kahraman, Deniz Cansen; DOĞAN, TUNCA; Martin, M.; Atalay, Mehmet Volkan (2021-03-01) Motivation: Identification of interactions between bioactive small molecules and target proteins is crucial for novel drug discovery, drug repurposing and uncovering off-target effects. Due to the tremendous size of the ch...
Obituaries: Ahmet ACAR Özgüven, Hasan Nevzat; Oran, Adil; Sargın, Güven Arif; Pamir, Haluk; Özgenel, Lale; Savaş Sargın, Ayşen; Atalay, Mehmet Volkan; Güner, Zehra Nuray; Onay, Lamia Zeynep (Orta Doğu Teknik Üniversitesi (Ankara, Turkey), 2021-1-01)

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