Nested Bayesian Inference Algorithm in the Construction of Time-Course Biological Networks’ Data

Farnoudkia, Hajar
Purutçuoğlu Gazi, Vilda


Nested and parallel sparse algorithms for arterial fluid mechanics computations with boundary layer mesh refinement
Manguoğlu, Murat; Sameh, Ahmed H.; Tezduyar, Tayfun E. (Wiley, 2011-01-30)
Arterial fluid-structure interaction (FSI) computations involve a number of numerical challenges. Because blood flow is incompressible, iterative solution of the fluid mechanics part of the linear equation system at every nonlinear iteration of each time step is one of those challenges, especially for computations over slender domains and in the presence of boundary layer mesh refinement. In this paper we address that challenge. As test cases, we use equation systems from stabilized finite element computati...
Nested Iterative Solutions of Electromagnetic Problems Using Approximate Forms of the Multilevel Fast Multipole Algorithm
Onol, Can; Ucuncu, Arif; Karaosmanoglu, Bariscan; Ergül, Özgür Salih (2017-03-24)
Nested iterative solutions using full and approximate forms of the multilevel fast multipole algorithm (MLFMA) are presented for efficient analysis of electromagnetic problems. The developed mechanism is based on preconditioning an iterative solution via another iterative solution, and this way, nesting multiple solutions as layers. The accuracy is systematically reduced from top to bottom by using the on-the-fly characteristics of MLFMA, as well as the iterative residual errors. As a demonstration, a three...
Nested U-ring resonators: a novel multi-band metamaterial design in microwave region
Turkmen, O.; EKMEKÇİ, Evren; Sayan, Gönül (Institution of Engineering and Technology (IET), 2012-07-17)
In this study, a novel metamaterial topology, called M-band nested U-ring resonator (M-NURR), is proposed to provide multiple band operation with an electrically small and geometrically simple unit cell design. The M-NURR unit cell has M-nested and unconnected U-shaped metal rings printed on a dielectric substrate where each ring is primarily associated with a distinct LC type resonance frequency where L and C stand for inductance and capacitance, respectively. Therefore this M-NURR topology has the novel p...
Nested local symmetry set
Tarı, Zehra Sibel (Elsevier BV, 2000-08-01)
A local-symmetry-based representation for shapes in arbitrary dimensions and a method for its computation are presented. The method depends on analyzing the Hessian of a specific boundaryness function, v, which is computed as the minimizer of an energy functional. The method is basically a generalized ridge finding scheme in which the ridges are defined in terms of the orbit of the gradient vector del v under the action of the Hessian of v. Once the ridges are determined, the local extrema of the magnitude ...
Nested structure of time consciousness and its dependence on mental time travel competence and episodic memory
Dural Özer, Özge; Sol, Ayhan; Michaelian, Kourken; Department of Philosophy (2013)
The main objective of this master thesis is to clarify the nested structure in time consciousness, depending on mental time travel and episodic memory. Time consciousness, mental time travel and episodic memory are connected, and function depending on each other. Mental time travel ability enables us to imagine personal future events. Episodic memory allows us to travel mentally into both past and future. Similarity between remembering the past and imagining the future indicates that episodic memory system ...
Citation Formats
H. Farnoudkia and V. Purutçuoğlu Gazi, “Nested Bayesian Inference Algorithm in the Construction of Time-Course Biological Networks’ Data,” 2019, Accessed: 00, 2021. [Online]. Available: