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  • Systems-level analysis reveals multiple modulators of epithelial-mesenchymal transition and identifies DNAJB4 and CD81 as novel metastasis inducers in breast cancer 

    Kagiali, Zeynep Cansu Üretmen; Sanal, Erdem; Karayel, Özge; Polat, Ayşe Nur; Saatçi, Özge; Ersan, Pelin Gülizar; Trappe, Kathrin; Renard, Bernhard Y.; Önder, Tamer T.; Tunçbağ, Nurcan; Şahin, Özgür; Özlü, Nurhan (AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC, 11200 ROCKVILLE PIKE, SUITE 302, ROCKVILLE, MD, UNITED STATESMolecular and Cellular Proteomics, 2019-09)
    Epithelial-mesenchymal transition (EMT) is driven by complex signaling events that induce dramatic biochemical and morphological changes whereby epithelial cells are converted into cancer cells. However, the underlying ...
  • Cortical processes underlying the effects of static sound timing on perceived visual speed 

    Kaya, Utku; Kafaligönül, Hulusi (Neuroimage, 2019-10-01)
    It is well known that the timing of brief static sounds can alter different aspects of visual motion perception. For instance, previous studies have shown that time intervals demarcated by brief sounds can modulate perceived ...
  • Integrative network modelling of the dasatinib treatment in glioblastoma stem cells 

    Senger, Gökçe; Tunçbağ, Nurcan; Department of Bioinformatics (2019)
    Glioblastoma (GBM), the most aggressive type of the glial tumours, is thought to be widely promoted by stem-like cells. Although certain cancer types have been radically treated with Receptor Tyrosine Kinases (RTKs) ...
  • The Relationship between exam performance and emotion regulation capacity of university students 

    Kadirdağ, Borabay; Gökçay, Didem; Department of Cognitive Sciences (2019)
    The main objective of this thesis is to examine the effect of cognitive reappraisal and expressive suppression and on exam performance in Turkish university students. The study is based on the “appraisal-tendency framework” ...
  • Performance evaluation of real-time noisy speech recognition for mobile devices 

    Yurtcan, Yaser; Günel Kılıç, Banu; Department of Information Systems (2019)
    Communication is important for people. There are many available communication methods. One of the most effective methods is through the use of speech. People can comfortably express their feelings and thoughts by using ...
  • Brain oscillatory analysis of visual working memory errors 

    Mapelli, Igor; Özkurt, Tolga Esat; Department of Health Informatics (2019)
    Brain dynamics of memory formation were explored throughout a working memory (WM) task. Electroencephalography data were acquired from participants while presented with grayscale photos of object categories (each category ...
  • The Role of expertise on code review for security: an eye tracking study 

    Kaplan, Utku; Acartürk, Cengiz; Department of Cyber Security (2019)
    To improve the quality of the software and find security vulnerabilities, code review is usually performed during software development activities. The experience of software developers reviewing the code may affect the ...
  • Application of subspace clustering to scalable malware clustering 

    Işıktaş, Fatih; Betin Can, Aysu; Department of Information Systems (2019)
    In recent years, massive proliferation of malware variants has made it necessary to employ sophisticated clustering techniques in malware analysis. Choosing an appropriate clustering approach is very important especially ...
  • An Experimental investigation of ICT expertise by gaze analysis 

    Kaya, Erdi; Acartürk, Cengiz; Department of Cognitive Sciences (2019)
    The aim of the present study is to contribute to the approaches used for the division of experts and novices according to the approaches and differences in question answering. For this purpose, an experiment was conducted ...
  • Sequence alignment based process family extraction 

    Esgin, Eren; Karagöz, Pınar; Çetin, Yasemin; Department of Information Systems (2018)
    Business Process Management (BPM) gains growing attention by generic process design and execution capabilities empowered by process-aware information systems. During execution of these transactional information systems, ...
  • Software equivalence checking based on unit testing and symbolic execution 

    Ünaltay, Burak; Koçyiğit, Altan; Department of Information Systems (2018)
    Hardware is one of the best representatives of our ever-changing world. For most of the end users this is nothing but a nuisance as they have to renew their electronics each year. For the embedded system designers who has ...
  • Production and perception of intonational cues expressing epistemic confidence in Turkish 

    Hülagü, Ayşenur; Özge, Umut; Hohenberger, Annette Edeltraud; Department of Cognitive Sciences (2018)
    This study investigates how certainty and uncertainty are conveyed and comprehended among Turkish interlocutors. A production study was conducted to elicit utterances under epistemic modalities of "certain" and "uncertain" ...
  • Preschool children’s story construction and use of deixis in fictional narratives 

    Bilgiç, Dilek Deniz; Zeyrek Bozşahin, Deniz; Department of Cognitive Sciences (2018)
    The Deictic Shift theory suggests that for interpreting an utterance, deictic terms must be used and one’s Deictic Center needs to be shifted with respect to the speaker’s. In the present study, Turkish preschool children’s ...
  • Application of particle swarm optimization algorithm in allocating cloud resources for video on demand 

    Aygün, Betül; Günel Kılıç, Banu; Coşar, Ahmet; Department of Information Systems (2018)
    Video streaming services whether on demand or live has become one of the most popular services used recently. However, investments made for these type of applications cause a very serious financial problem just because ...
  • Transfer and maintenance effects of n-back working memory training in interpreting students: a behavioural and optical brain imaging study 

    Öztürk, Asiye; Çakır, Murat Perit; Hohenberger, Annette Edeltraud; Department of Cognitive Sciences (2018)
    Working memory training is seen as an effective tool for enhancing performance during a variety of high level cognitive tasks for different groups such as children, older people, and individuals with cognitive problems as ...
  • Cognitive, perceptual-motor and social factors in tool making in children 

    Gönül, Gökhan; Çakır, Murat Perit; Department of Cognitive Sciences (2018)
    Children are proficient tool users; however, pre-school children are not proficient in every aspect of tool-related behaviors, in particular tool making. Considering the cognitive and social abilities of humans, this thesis ...
  • Essential design components of genetic data enabled mobile personal health record systems 

    Özkan, Özlem; Aydın Son, Yeşim; Aydınoğlu, Arsev Umur; Department of Medical Informatics (2018)
    The rapid growth in the use of genetic tests in healthcare has opened a new discussion on the redesign of electronic health records to cover genetic/genomic data. Today, this information is treated in the same way as ...
  • Eye movement control in Persian: a corpus-analytic approach 

    Soleymani, Fatemeh; Acartürk, Cengiz; Department of Cognitive Sciences (2018)
    In the Latin script languages, specifically the English language, there exist studies on the eye movements’ pattern during reading. Thus, this study was conducted in order to investigate eye movement patterns in Persian. ...
  • LYNXTUN 

    Okan, Galip Oral; Baykal, Nazife; Tezcan, Cihangir; Department of Cyber Security (2018)
    Lynxtun is a VPN solution that allows the creation of a secure tunnel between two hosts over an insecure network. The Lynxtun Protocol transmits fully encrypted datagrams with a fixed size and at a fixed interval using ...
  • Automatic information coverage assessment of diabetes websites 

    Bulut, Güliz; Taşkaya Temizel, Tuğba; Department of Information Systems (2018)
    People frequently access Internet to look up health information. However, as the quality of websites may vary significantly, the treatment recommendations and guidelines provided by some of these web sites may be fallacious. ...

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