Analysis of candidate cocaine and amphetamine regulated transcript (CART) receptor genes: changes in ERK phosphorylation in N2a cells

Download
2019
Özkılıç, Ayla
CART is widely expressed in both the central and peripheral nervous system. It encodes CART peptides (CART 55-102 and CART 62-102) that are neurotransmitters and hormones and are positively modulated by leptin which is a satiety hormone. These neuropeptides have important roles in controlling feeding behavior, metabolic rate, hyperphagy, obesity and type 2 diabetes, drug reward, bone remodeling, sensory processing, neuroendocrine function, stress, anxiety, cardiovascular function, gastrointestinal development. Despite the importance of CART, its receptor has not been discovered yet. To understand molecular and cellular pathways of CART, identification of the CART receptor has a high priority. Studies related to binding of CART showed that CART 55-102 induced dose and time dependent activation of extracellular signal-regulated kinase (ERK) 1 and 2. Moreover, inhibition of CART 55-102 by genistein and pertussis toxin indicated that the upstream kinases MEK1 and 2 were involved the signaling pathway. Therefore, a role for the Gi/Go coupled G protein coupled receptor (GPCR) in CART 55-102 signaling was considered. Microarray studies were used to analyze over a thousand GPCR signaling related gene products. Among which, 7 candidate genes that may be a CART receptors were determined. In this study, we aimed to express these 7 different candidate CART receptor genes into N2a cells (mouse neuroblastoma cells), stimulate them with CART 62-102 and analyze ERK 1 and 2 phosphorylation (pERK) using Western Blot. We hypothesized that candidate gene/s might increase pERK in presence of a candidate CART receptor. The results show that p-ERK 1/2 signaling has not been detected when the cells were transfected with 7 candidate genes. In conclusion, further investigations are needed to be performed to confirm possibility of these genes candidacy as a potential CART receptor.

Suggestions

Identification of interaction sites of G protein-coupled receptors using machine learning techniques
Şahin, Mehmet Emre; Can, Tolga; Department of Computer Engineering (2014)
G protein-coupled receptors (GPCRs), which play a crucial role in a host of pathophysiological pathways, form the largest and most divergent receptor family. Typically, they transmit outer signals to the inner cell by interacting with G-proteins. The emerging concept of GPCR dimerization has unsettled the classical idea that GPCRs function as monomeric units. Prediction of the interface residues of GPCR dimers is a challenging topic. The method proposed in this thesis trains itself with known interfaces fro...
Identifying the putative G protein coupled receptor/s candidates of cocaine and amphetamine regulated transcript (CART) peptide
Kasap, Merve; Son, Çağdaş Devrim; Department of Biology (2014)
Cocaine and amphetamine regulated transcript (CART) peptides are neurotransmitters and endocrine factors in the nervous system and periphery. CARTPT codes for a neuropeptide hormone with a number of biological roles which are important for the mammalian physiology such as controlling feeding behavior, drug reward, bone remodeling, sensory processing, neuroendocrine function, stress anxiety, cardiovascular function, gastrointestinal motility and development. In hypothalamus, behavioral and drug studies showe...
Identification of Three Novel FBN1 Mutations and Their Phenotypic Relationship of Marfan Syndrome
KAYHAN, GÜLSÜM; ERGÜN, MEHMET ALİ; Ergun, Sezen Guntekin; KULA, SERDAR; PERÇİN, Ferda Emriye (Mary Ann Liebert Inc, 2018-07-26)
Background: Marfan syndrome (MS), a connective tissue disorder that affects ocular, skeletal, and cardiovascular systems, is caused by heterozygous pathogenic variants in FBN1. To date, over 1800 different pathogenic variants have been reported.
In Vivo detection of GPCR dimerizations in saccharomyces cerevisiae using FRET and BIFC
Üstünkaya, Beren; Son, Çağdaş Devrim; Department of Biology (2014)
G protein-coupled receptors (GPCRs) are a class of membrane proteins that are composed of seven transmembrane domain and mediate physiological response to a diverse array of stimuli. In eukaryotic microorganisms, GPCRs regulate cell growth, development, morphogenesis, motility, and life span. In higher eukaryotic organisms as humans, they mediate the action of hundreds of peptide hormones, sensory stimuli, odorants, neurotransmitters, and chemokine. Due to their wide spectrum of action mechanisms, GPCRs are...
Prediction of transmembrane regions of g protein-coupled receptors using machine learning techniques
Çınar, Muazzez Çelebi; Son, Çağdaş Devrim; Department of Molecular Biology and Genetics (2019)
G protein-coupled receptors (GPCRs) are one of the largest and the most significant membrane receptor families in eukaryotes. They transmit extracellular stimuli to the inside of the cell by undergoing conformational changes. GPCRs can recognize a diversity of extracellular ligands including hormones, neurotransmitters, odorants, photons, and ions. These receptors are associated with a variety of diseases in humans such as cancer and central nervous system disorders, and can be proclaimed as one of the most...
Citation Formats
A. Özkılıç, “Analysis of candidate cocaine and amphetamine regulated transcript (CART) receptor genes: changes in ERK phosphorylation in N2a cells,” M.S. - Master of Science, Middle East Technical University, 2019.