Show/Hide Menu
Hide/Show Apps
Logout
Türkçe
Türkçe
Search
Search
Login
Login
OpenMETU
OpenMETU
About
About
Open Science Policy
Open Science Policy
Open Access Guideline
Open Access Guideline
Postgraduate Thesis Guideline
Postgraduate Thesis Guideline
Communities & Collections
Communities & Collections
Help
Help
Frequently Asked Questions
Frequently Asked Questions
Guides
Guides
Thesis submission
Thesis submission
MS without thesis term project submission
MS without thesis term project submission
Publication submission with DOI
Publication submission with DOI
Publication submission
Publication submission
Supporting Information
Supporting Information
General Information
General Information
Copyright, Embargo and License
Copyright, Embargo and License
Contact us
Contact us
Monitoring of Tryptophan as a Biomarker for Cancerous Cells in Terahertz (THz) Sensing
Date
2016-02-17
Author
Altan, Hakan
Gok, Seher
Ozyurt, Ipek
Severcan, Feride
Metadata
Show full item record
This work is licensed under a
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License
.
Item Usage Stats
249
views
0
downloads
Cite This
Tryptophan is an extremely important amino acid for a variety of biological functions in living organisms. Changes in the concentration of this amino acid can point to identification of cancerous tissues or even confirm symptoms of depression in patients. Therefore it is extremely important to identify and quantify tryptophan concentrations in human blood as well as in in-vivo diagnostic studies. Here a reflection based terahertz pulsed spectroscopy system was used to study the interaction of THz pulses with cancerous cells to gauge the possibility of using L-tryptophan as a biomarker for THz sensing of diseases. Initial measurements were performed on human colon adenocarcinoma cells and human breast cancer cells cultivated on glass slides. The glass slides utilized in the growth process limited the measurements not only to reflection based geometries but also limited the analysis of the samples in the frequency domain due to the highly absorbing nature of glass in the THz region. The useful bandwidth was limited to frequencies below 0.6THz which prohibited us from investigating the effects of L-tryptophan in these samples. Even with the limited frequency range the measurements show that there are slight differences in the transmission of the THz pulse through different samples.
Subject Keywords
Terahertz spectroscopy
,
Reflection mode
,
L-tryptophan
,
Human breast cancer cells
,
Human colon adenocarcinoma cells
URI
https://hdl.handle.net/11511/34941
DOI
https://doi.org/10.1117/12.2218032
Collections
Department of Physics, Conference / Seminar
Suggestions
OpenMETU
Core
Concentration-Based Measurement Studies of L-Tryptophan Using Terahertz Time-Domain Spectroscopy (THz-TDS)
Ozer, Zeynep; Gok, Seher; Altan, Hakan; Severcan, Feride (SAGE Publications, 2014-01-01)
L-Tryptophan is an extremely important amino acid for a variety of biological functions in living organisms. In this study we were able to measure changes in the concentration of L-tryptophan when incorporated into pellets with polyethylene as a host. The changes were measured both through the characteristic absorption bands of the C11 and C12 bonds in the low terahertz frequency range and using changes in the refractive index where pellets with higher concentrations of L-tryptophan showed higher refractive...
AN ONCOGENIC ISOFORM SWITCH LEADS TO HNRNPA1 OVEREXPRESSION IN TRIPLE NEGATIVE BREAST CANCER
Erdem, Murat; Erson Bensan, Ayşe Elif; Department of Biology (2022-8-05)
HNRNPA1 is one of the most abundant and ubiquitously expressed nuclear proteins and plays a significant role in RNA biology. It has many diverse functions in cellular nucleic acid metabolisms, including mRNA transport, miRNA maturation, and telomere maintenance. Emerging evidence suggest HNRNPA1 to be an important RNA binding protein (RBP) to regulate various RNA related processes in cancer cells. However, deregulation of HNRNPA1 expression and its action mechanisms are unclear in breast cancers. The study...
Development of amperometric cholinesterase biosensors based on a conducting polymer for detection of anti-dementia drugs and pesticides
Turan, Janset; Toppare, Levent Kamil; Özkan, Necati; Department of Polymer Science and Technology (2016)
Cholinesterase enzymes are considered as one of the most important enzymes in living organisms and they are targeted by many inhibitors. Cholinesterase inhibitors are potentially toxic however they also have certain applications as treatment of dementia and Alzheimer’s diseases. These inhibitors can bind the active side of the cholinesterase enzymes forming stable complexes. This inhibitory effect can be used to construct fast and sensitive detection system. Also, conducting polymers are known to be well su...
Induction of Partial EMT with Nutrient Restriction and Lysosomal Alkalinization in Caco-2 Colorectal Cancer Cells
Hüsnügil, Hepşen Hazal; Banerjee, Sreeparna; Department of Biology (2022-8)
Limited availability of nutrients to cancer cells can result in metabolic rewiring, manifesting in the activation of processes such as autophagy for survival. Our study shows for the first time that Caco-2 cells incubated in a nutrient-restriction (NR) medium of low glucose, glutamine and serum for 48h were viable but less proliferative, demonstrated robust autophagy induction and lower sensitivity to 5- Fluorouracil. However, the cargo protein p62 was not degraded efficiently, suggesting a slower autop...
IDENTIFYING ISOFORM SWITCHES IN BREAST CANCER
HENDEN, Şevki Onur; Can, Tolga; Department of Computer Engineering (2021-9-9)
Characterizing the human genome's molecular functions and their variations across people is vital for understanding the cellular processes behind human genetic characteristics and diseases. With the advent of single-cell RNA sequencing (scRNA-seq), it is now possible to investigate gene expression in individual cells. Although a number of scRNA-seq bioinformatics tools are now available, many of them focus on overall gene expression levels and, as a result, often ignore heterogeneity caused by individual tr...
Citation Formats
IEEE
ACM
APA
CHICAGO
MLA
BibTeX
H. Altan, S. Gok, I. Ozyurt, and F. Severcan, “Monitoring of Tryptophan as a Biomarker for Cancerous Cells in Terahertz (THz) Sensing,” 2016, vol. 9703, Accessed: 00, 2020. [Online]. Available: https://hdl.handle.net/11511/34941.