Abiotic stress tolerance and growth responses of transgenic potato (Solanum tuberosum L. cv. Kennebec) plants expressing rice Osmyb4 gene

2012-09-23
AYDIN, GÜLSÜM
Yucel, Meral
Öktem, Hüseyin Avni
MYB transcription factors are involved in diverse biochemical and physiological processes such as regulation of secondary metabolism, meristem formation, cell morphogenesis and floral and seed development. They are also involved in certain defence and stress responses and in hormone signalling. In the present study, we developed transgenic potato (Solanum tuberosum L. cv. Kennebec) expressing Oryza sativa myb4 gene, encoding MYB4 transcription factor, driven by either CaMV35S constitutive promoter or cold inducible COR15a promoter. The transformation frequencies were 37.6% (pCORmyb4) and 27.5% (pCaMVmyb4). A total of four pCOR lines and three pCaMV lines were selected randomly for bioassays. The transgenic plants were not growth retarded and there was no significant difference (p < 0.05) in their tuber yield compared to non-transgenic wild type plants. Although chlorophyll a, chlorophyll b and anthocyanin contents of transgenic lines were similar to wild type, one of the pCaMV lines had a significantly higher carotenoid content. The total sugar contents of two lines were also significantly higher. Transgenic plants were also evaluated for abiotic stress tolerances. There was no significant difference in boron and freezing tolerances of wild type and transgenic lines. However a pCOR line and a pCaMV line were more salt tolerant than wild type with respect to growth parameters. These results demonstrated that heterologous expression of myb4 in potato affects carotenoid and total sugar content and also enhances salt stress tolerance. The results also showed that effect of myb4 expression might be different in each transgenic line under the conditions tested.
NEW BIOTECHNOLOGY

Suggestions

Inference of Gene Regulatory Networks Via Multiple Data Sources and a Recommendation Method
Ozsoy, Makbule Gulcin; Polat, Faruk; Alhajj, Reda (2015-11-12)
Gene regulatory networks (GRNs) are composed of biological components, including genes, proteins and metabolites, and their interactions. In general, computational methods are used to infer the connections among these components. However, computational methods should take into account the general features of the GRNs, which are sparseness, scale-free topology, modularity and structure of the inferred networks. In this work, observing the common aspects between recommendation systems and GRNs, we decided to ...
Applications of terahertz spectroscopy in biosystems
Plusquellic, David F.; SİEGRİST, Karen; Heilweil, Edwin J.; Esentürk, Okan (Wiley, 2007-12-03)
Terahertz (THz) spectroscopic investigations of condensed-phase biological samples are reviewed ranging from the simple crystalline forms of amino acids, carbohydrates and polypeptides to the more complex aqueous forms of small proteins, DNA and RNA. Vibrationally resolved studies of crystalline samples have revealed the exquisite sensitivity of THz modes to crystalline order, temperature, conformational form, peptide sequence and local solvate environment and have given unprecedented measures of the bindin...
PageRank-flux On Graphlet-Guided-Network(PRO-GGNet): A Method for Pathway Reconstruction and Multi-Omic Data Integration
Arıcı, Kaan; Tunçbağ, Nurcan (Orta Doğu Teknik Üniversitesi Enformatik Enstitüsü; 2022-10)
The recent advancement of omic technologies provides snapshots of cells, tissues, or patients identifying prominent genes, proteins, metabolites, and small molecules. However, accumulated big data on various omic data types may inherently make diseases or perturbations incomprehensible. Network inference or reconstruction methods map a set of significantly altered proteins/genes/metabolites to a given reference network that is composed of already known relations or interactions. Followingly, the signals fro...
Inference of large-scale networks via statistical approaches
Ayyıldız Demirci, Ezgi; Purutçuoğlu Gazi, Vilda; Department of Statistics (2019)
In system biology, the interactions between components such as genes, proteins, can be represented by a network. To understand the molecular mechanism of complex biological systems, construction of their networks plays a crucial role. However, estimation of these networks is a challenging problem because of their high dimensional and sparse structures. The Gaussian graphical model (GGM) is widely used approach to construct the undirected networks. GGM define the interactions between species by using the con...
Immune modulatory effects of pediococcus pentosaceus derived membrane vesicles: mechanism of action and therapeutic applications
Alpdündar Bulut, Esin; Gürsel, Mayda; Department of Biology (2018)
In our previous studies, we characterized 5 different human gram positive commensal bacteria derived membrane vesicles (MVs) and compared their activity with non-pathogenic E.coli derived membrane vesicles. Results showed that commensal bacteria derived MVs had immunomodulatory properties whereas non-pathogenic E.coli derived membrane vesicles had immune stimulatory properties. In this thesis, we aimed to focus our attention to Pediococcus pentosaceus-derived MVs that displayed the highest immunomodulatory ...
Citation Formats
G. AYDIN, M. Yucel, and H. A. Öktem, “Abiotic stress tolerance and growth responses of transgenic potato (Solanum tuberosum L. cv. Kennebec) plants expressing rice Osmyb4 gene,” NEW BIOTECHNOLOGY, pp. 0–0, 2012, Accessed: 00, 2020. [Online]. Available: https://hdl.handle.net/11511/35892.