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İstatistiksel metotlar ile genom-ölçekli protein ağlarının oluşturulması ve analizi
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T1RVME9Uaz0.pdf
Date
2010
Author
Söyler, Alper
Can, Tolga
Pamuk, Bahar
Bokar, Awadh H. Ali
Yaveroğlu, Nebil Ömer
Akkoyun, Emrah
Baloğlu, Onur
Turanalp, Emin Mehmet
Güney, Doğacan Tacettin
Yaşar, Sevgi
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Bu projede büyük ölçekli protein-protein etkileşim ağlarının işlemsel metotlar ile tahmin edilmesi ve elde edilen ağların yine işlemsel metotlar ile analiz edilmesi amaçlanmıştır. Proje kapsamında biyologlara ilgilendikleri organizma hakkında sistem biyolojisi seviyesinde bulgular sağlayacak çeşitli teknikler geliştirilmiştir. Özellikle yeni sekanslanmış organizmaları hedefleyen teknikler sayesinde son yıllarda artan sekanslama projelerinden elde edilen verilerin etkili bir şekilde kullanılmasına olanak sağlanmıştır. Sadece protein sekansı kullanılarak protein etkileşimlerinin tahmin edilmesi, büyük ölçekli ağların görselleştirilmesi, ağların işlemsel yollarla otomatik olarak analiz edilerek birbiri ile çok etkileşen protein modüllerinin bulunması ve etkileşim ağlarında sık geçen fonksiyonel örüntülerin bulunması için metotlar geliştirilmiştir. Proje kapsamında geliştirilen metotlar çeşitli yayın ve tezler aracılığıyla bilim dünyasına sunulmuştur. Proje sonucu A. Fumigatus organizması için elde edilen ağ modülleri de ayrıca http://bioserver.ceng.metu.edu.tr/AFumigatus/ adresinde sunulmaktadır.
Subject Keywords
Biyoloji
,
İstatistik ve Olasılık
,
Protein-protein etkileşim ağları
,
İstatistiksel metotlar
,
Ağ analizi
,
Ağ görselleştirme
,
Aspergillus fumigatus
URI
https://app.trdizin.gov.tr/publication/project/detail/T1RVME9Uaz0
https://hdl.handle.net/11511/49404
Collections
Department of Computer Engineering, Project and Design
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A. Söyler et al., “İstatistiksel metotlar ile genom-ölçekli protein ağlarının oluşturulması ve analizi,” 2010. Accessed: 00, 2020. [Online]. Available: https://app.trdizin.gov.tr/publication/project/detail/T1RVME9Uaz0.