Show/Hide Menu
Hide/Show Apps
Logout
Türkçe
Türkçe
Search
Search
Login
Login
OpenMETU
OpenMETU
About
About
Open Science Policy
Open Science Policy
Open Access Guideline
Open Access Guideline
Postgraduate Thesis Guideline
Postgraduate Thesis Guideline
Communities & Collections
Communities & Collections
Help
Help
Frequently Asked Questions
Frequently Asked Questions
Guides
Guides
Thesis submission
Thesis submission
MS without thesis term project submission
MS without thesis term project submission
Publication submission with DOI
Publication submission with DOI
Publication submission
Publication submission
Supporting Information
Supporting Information
General Information
General Information
Copyright, Embargo and License
Copyright, Embargo and License
Contact us
Contact us
Determining the role of mutation load in mammalian senescence
Date
2016-12-31
Author
Somel, Mehmet
Özer, Füsun
Turan, Zeliha Gözde
Koptekin, Dilek
Ghalichi, Ayshin
Metadata
Show full item record
This work is licensed under a
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License
.
Item Usage Stats
231
views
0
downloads
Cite This
In most multicellular species, aging is accompanied by an increasing risk of disease and mortality, a process termed senescence. The evolutionary causes and genetic bases of senescence are little understood. Senescence is usually associated with accumulating cellular damage, although a number of theories suggest that harmful mutations that are expressed only at late age could also contribute to the aging phenotype. Analyzing primate brain transcriptome data, we recently identified a pattern that would support this latter notion: genes expressed at high levels in old individuals, compared to genes expressed at high levels in young adults, tend to be evolutionarily less conserved, suggesting that they might harbor a higher proportion of deleterious mutations. This result suggests that a deleterious mutation load may indeed play a role in senescence. In this project, we will use a wide array of transcriptome datasets across multiple tissues and mammalian species, to identify the generality of this pattern. Using a new metric, for the first time, we will measure the decrease in negative selection pressure with age. The results will shed light into one highly debated mechanism of senescence.
Subject Keywords
Evrim
,
Biyoinformatik
,
Moleküler Biyoloji ve Genetik
,
Moleküler Biyoloji ve Genetik
,
Moleküler Biyoloji ve Genetik
URI
https://hdl.handle.net/11511/61972
Collections
Department of Biology, Project and Design
Suggestions
OpenMETU
Core
Notable decrease in transcriptome conservation during mammalian aging
Turan, Zeliha Gözde; Somel, Mehmet; Department of Biology (2016)
Aging is a complex process that causes decline in organisms’ reproductive capacity and chance of survival. Even though aging tends to reduce fitness, it is not eliminated by natural selection and is observed in many multicellular species, and this leads to an evolutionary paradox. The mutation accumulation theory states that due to the declining force of natural selection with age, old-age-expressed deleterious mutations will not be effectively eliminated, and can contribute to the aging phenotype. A limite...
META-ANALYSIS OF GENE EXPRESSION HETEROGENEITY IN BRAIN DEVELOPMENT AND AGING
Işıldak, Ulaş; Somel, Mehmet; Department of Biology (2022-9-1)
Aging is a complex process associated with the accumulation of stochastic genetic and epigenetic alterations, leading to functional decline and increased risk for disease and death. Although some previous studies demonstrated a tendency towards increased inter-individual heterogeneity during aging, whether it is a function of time that starts at the beginning of life is unknown. Its functional consequences and regulations have also not been systematically studied. In this study, I addressed these questions ...
Development of nanocomposite hydrogels for controlled release of proteins
Sivri, Seda; Bat, Erhan; Yılmazer, Ülkü; Department of Chemical Engineering (2016)
Owing to the fact that a vast number of biological functions are performed via proteins in living tissues, many human diseases are resulted from the malfunction or deficiency of particular proteins. Hence, there has been extensive work on industrial production of therapeutic proteins for the treatment of diseases in recent years. However, proteins could be denatured or degraded in vivo in a short time before reaching target site due to their fragile nature. Additionally, owing to the renal clearance and sho...
Collagen scaffolds with in situ grown calcium phosphate for osteogenic differentiation of wharton’s jelly and menstrual blood stem cells
Karadaş, Özge; Hasırcı, Vasıf Nejat; Köse, Gamze Torun; Department of Biotechnology (2011)
The importance of developing new techniques for the treatment of bone and joint diseases is increasing continuosly together with the increase of human population and the average life span. Especially bone fractures as a result of osteoporosis are often seen in humans older than 50 years old. The expenses of bone and joint disease operations are very high and the duration of recovery is long. Because of these reasons World Health Organization, The United Nations and 37 countries announced that the years 2000...
Investigating the potential of bacillus calmette-guerin vaccine russia strain, cpg oligonucleotides and intravenous immunoglobulin to induce trained immunity in the context of antiviral immunity
Baydemir, İlayda; Gürsel, Mayda; Department of Molecular Biology and Genetics (2020-10-12)
Innate immune cells undergo metabolic and epigenetic reprogramming in response to specific stimuli, that enable a more robust immune response to secondary exposure to a wide variety of pathogens. This process of innate immune memory development has been termed as Trained Immunity (TI). BCG vaccine is one well-known inducer of innate immune memory. In vivo administration of CpG ODNs or Intravenous Immunoglobulin (IVIg) can also exert heterologous anti-microbial protective immunity. In this thesis, we sought ...
Citation Formats
IEEE
ACM
APA
CHICAGO
MLA
BibTeX
M. Somel, F. Özer, Z. G. Turan, D. Koptekin, and A. Ghalichi, “Determining the role of mutation load in mammalian senescence,” 2016. Accessed: 00, 2020. [Online]. Available: https://hdl.handle.net/11511/61972.