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Graduate School of Informatics, Thesis
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INVESTIGATING THE SEMANTIC SIMILARITY EFFECT ON DELAYED FREE RECALL USING WORD EMBEDDINGS
Büyükyaprak, Burak; Yet, Barbaros; Kılıç Özhan, Aslı; Department of Cognitive Sciences (2025-1-10)
Episodic memory is a type of long-term memory that encodes and retrieves personal experiences associated with their context. Previous episodic memory studies showed that the context or pre-existing knowledge about retrieve...
Brain Network Connectivity of the N-Back Task in Schizophrenia Groups According to M1 Receptor Polymorphism
Çağlayan, Ece; Çakır, Murat Perit; Kır, Yağmur; Department of Medical Informatics (2025-1-10)
This study explores the impact of clozapine, an atypical antipsychotic, on cognitive function and brain connectivity in 43 schizophrenia patients, focusing on the M1 muscarinic receptor and its rs2067477 polymorphism. Buil...
A robust approach for predicting mutation effects on transcription factor binding: insights from mutational signatures in 560 breast cancer samples
Kılınç, Hüseyin Hilmi; Otlu Sarıtaş, Burçak; Department of Bioinformatics (2025-1-07)
Somatic mutations, particularly in non-coding regions, can perturb transcription factor (TF)-DNA interactions, influencing gene regulatory networks and contributing to cancer development. Thus, they require further compreh...
FACILITATING COLLABORATIVE DEEPFAKE DETECTION BASED ON BLOCKCHAIN TECHNOLOGY AND REPUTATION
Zemin, Mustafa; Baykal, Nazife; Department of Information Systems (2025-1-07)
The increasing popularity of deepfake technology is progressively posing a significant threat to information integrity and security. There are numerous solutions to detect deepfakes, but they usually fail to detect all o...
Using Deep Learning Models for Structural Break Detection in Time Series
Yazıcı, Pınar Cemre; Yozgatlıgil, Ceylan; Department of Information Systems (2024-12-06)
This study addresses the detection and localization of structural breaks in time series data through a comprehensive pipeline, encompassing synthetic data generation, model training, and validation. Synthetic datasets were...
Adaptive system for dynamic handling of concept drift: detection, modeling, and weighted ensemble predictions
Özcan, Barış; Günel Kılıç, Banu; Department of Data Informatics (2024-12)
Machine learning models depend on the quality and quantity of data used in the training process. This dependency necessitates continuous development in data collection methods and the optimization of existing data resource...
A comparative analysis of various 3D mesh optimization algorithms for assessing effectiveness on sustaining virtual visual illusion
Eronat, Ümit; Tokel, Saniye Tuğba; Department of Modeling and Simulation (2024-11-29)
3D modeling is essential in fields like architecture, engineering, and virtual reality, but high-resolution 3D models often demand significant data and computational resources. Mesh simplification algorithms address this i...
DEVELOPING A FRAMEWORK TO EVALUATE THE USABILITY OF VIRTUAL AND MIXED REALITY ENVIRONMENTS TO PRACTICE MODEL-BASED SYSTEMS ENGINEERING
Karataş, Kaan; Sürer, Elif; Department of Modeling and Simulation (2024-11-26)
Systems Engineering is an interdisciplinary engineering field that focuses on the identification of the required components of a product and their specifications to achieve the purpose or objective. The emergence of Model-...
An analysis of kerberoasting attack and detection with supervised machine learning algorithms
Aksüt, Yasin; Tezcan, Cihangir; Department of Cybersecurity (2024-11)
Active Directory (AD) is one of the most widely used directory services today, playing a key role in organizing and managing network resources within an organization. In cybersecurity, AD serves as a significant component ...
NEURAL AND OCULAR CORRELATES OF CONCEPTUAL GROUNDING IN VERBAL INTERACTION: A MULTIMODAL HYPERSCANNING APPROACH
Yilmaz, Efecan; Çakır, Murat Perit; Cognitive Science (2024-9-28)
Effective communication depends on interlocutors agreeing on how to resolve ambiguities and constructing conceptual representations into shared meanings. To achieve this, continuous adaptation by all participants to establ...
Identifying potential therapeutic molecules for hepatocellular carcinoma through machine learning-based drug repurposing
Başer, Tuğçe; Otlu Sarıtaş, Burçak; Atalay, Rengül; Department of Medical Informatics (2024-9-06)
Hepatocellular carcinoma (HCC) is the most common primary liver cancer with a high mortality rate due to limited treatment options. Systemic drug treatments increase patient survival and often extend life by several months...
Negative Dependencies and Intervention Effects in Turkish
Karataş, Batuhan; Özge, Umut; Department of Cognitive Sciences (2024-9-06)
There are two main goals of this study: (i) to understand the descriptive properties of the negative dependencies (e.g. hiçbir, any, ever) in Turkish, which are basically expressions that require some kind of negation in a...
Perspective Taking in Narrative Comprehension: A Three-Factor Investigation
Akkuşçu, Mustafa; Zeyrek Bozşahin, Deniz; Temürcü, Ceyhan; Department of Cognitive Sciences (2024-9-6)
A narrative is a kind of discourse wherein events/situations revolving around characters are described. The field of narrative comprehension deals with how characters/events in narratives are represented in readers' cogn...
INDEPENDENCE OF CASE AND INNER ASPECT IN TURKISH
Dinçer, Derin; Özge, Umut; Department of Cognitive Science (2024-9-06)
Inner aspect refers to how a predicate describes the temporal structure of an event. Traditionally, an event with an endpoint is defined as delimited (i.e. telic), and an event without an endpoint is defined as nondelimite...
ANALYSIS OF TECHNICAL DEBT IN ML-BASED SOFTWARE DEVELOPMENT PROJECTS
Dayan Akman, Pelin; Özcan Top, Özden; Taşkaya Temizel, Tuğba; Department of Information Systems (2024-9-06)
Rapid development of Machine Learning (ML) algorithms and tools, and easier access to available frameworks and infrastructures have greatly fueled development of ML- based software solutions for real-world problems. Simila...
AN INVESTIGATION OF ISSUE LABELING IN OPEN SOURCE SOFTWARE PROJECTS USING LARGE LANGUAGE MODELS
Deniz, İrem Selin; Özcan Top, Özden; Koçyiğit, Altan; Department of Information Systems (2024-9-06)
In the evolving landscape of open source software projects, effective issue management remains a pivotal aspect of sustaining project success. Issue reports provide valuable information, as they are created for reporting b...
Exploration of practitioners' continuance intention toward Agile methodology usage: an empirical investigation
Vural, Tuğçe; Özkan Yıldırım, Sevgi; Department of Information Systems (2024-9-05)
Organizations have embraced Agile methodology due to its flexible approach to software development compared to traditional methodologies. As Agile practices become widespread, it is crucial to understand the factors influe...
Identification of Critical Success Factors in Data Analytics Projects
Demir, Nisa; Özcan Top, Özden; Aysolmaz, Banu; Department of Information Systems (2024-9-5)
Various data analytics applications are increasingly used by organizations to extract insights from data. There are numerous studies exploring the critical success factors (CSFs) in different data analytics fields includin...
Exploring attribution in Turkish discourse: an annotation-based analysis
Yaman, Aysu Nur; Zeyrek Bozşahin, Deniz; Department of Cognitive Sciences (2024-9-04)
Attribution involves recognizing and crediting sources, a process integral to both written and spoken discourse. This study extends existing frameworks, particularly the Penn Discourse TreeBank (PDTB), which elucidates how...
SIMULATING AND AUGMENTING TURBULENT THERMAL IMAGES FOR DEEP OBJECT DETECTION MODELS
Uzun, Engin; Akagündüz, Erdem; Department of Modeling and Simulation (2024-9-03)
Atmospheric turbulence, caused by factors such as temperature, wind speed, and humidity, leads to random fluctuations in the atmosphere’s refractive index. This phenomenon degrades the image quality of long-range observati...
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