Show/Hide Menu
Hide/Show Apps
Logout
Türkçe
Türkçe
Search
Search
Login
Login
OpenMETU
OpenMETU
About
About
Open Science Policy
Open Science Policy
Open Access Guideline
Open Access Guideline
Postgraduate Thesis Guideline
Postgraduate Thesis Guideline
Communities & Collections
Communities & Collections
Help
Help
Frequently Asked Questions
Frequently Asked Questions
Guides
Guides
Thesis submission
Thesis submission
MS without thesis term project submission
MS without thesis term project submission
Publication submission with DOI
Publication submission with DOI
Publication submission
Publication submission
Supporting Information
Supporting Information
General Information
General Information
Copyright, Embargo and License
Copyright, Embargo and License
Contact us
Contact us
A Comparative study for the production of recombinant intracellular glucose isomerase by escherichia coli and pichia pastoris
Download
index.pdf
Date
2014
Author
Yaman, Sena
Metadata
Show full item record
Item Usage Stats
294
views
101
downloads
Cite This
In this M.Sc. study, intracellular thermostable glucose isomerase (EC 5.3.1.5) production capacities of two metabolically engineered microorganisms, Escherichia coli and Pichia pastoris, were investigated. In this context, to construct intracellular glucose isomerase (GI) producing recombinant P. pastoris, the cells were transfected with pPICZ-A expression vector containing GI coding gene (xylA) of Thermus thermophilus. After the confirmation of the transfection, effects of co-carbon source sorbitol were investigated. CS0=30 g L-1 initial sorbitol concentration was found as optimal condition in terms of the cell growth and GI activity. The highest cell concentration and volumetric activity were attained as CX= 4.2 g L-1 (t=36h) and vi A=792.9 U L-1 (t=24h), respectively; whereas the highest activity was obtained as A=545 U L-1 (24h) using methanol as the sole carbon source. In the second part of the study, the research focused on GI production using Escherichia coli BL21 (DE3) pLysS carrying pRSETA::xylAint. Laboratory scale air- filtered shake bioreactor experiments were designed to determine the effects of carbon sources on the cell growth of E. coli. The highest cell concentration was obtained in CM0=30 g L-1 hydrolyzed molasses-based medium where the GI activity was A=2312 U L-1 being 3.17-fold higher than that of P. pastoris. Based on the revealed data, feeding strategy development experiments were carried out using E. coli. Effects of pulse and continuous feeding of molasses on GI production, the cell and by-product formations were investigated by four sets of pilot scale bioreactor experiments. The highest cell concentration was obtained as CX=17.9 g L-1 at t=28h with a pre-determined exponential feeding calculated for the specific growth rate of 0=0.1 h-1. In terms of GI activity, the most prospering strategy was PM-0.05. In this strategy, one molasses pulse given at t=7h and continuous feeding of molasses started at t=10h with a pre-determined exponential feeding rate of 0=0.05 h-1. The highest volumetric GI activity was obtained as A=29050 U L-1 at t=26h of the bioprocess with YX/S=0.20 g g-1 overall specific cell yield on subsrate and 48.8 g total substrate consumption.
Subject Keywords
Isomerases.
,
Escherichia coli.
,
Pichia pastoris.
,
Sucrose.
URI
http://etd.lib.metu.edu.tr/upload/12616786/index.pdf
https://hdl.handle.net/11511/23269
Collections
Graduate School of Natural and Applied Sciences, Thesis
Suggestions
OpenMETU
Core
Investigation of thermostable recombinant glucose isomerase production by sucrose utilizing escherichia coli
Akdağ, Burcu; Çalık, Pınar; Özdamar, Tunçer H.; Department of Biotechnology (2013)
The aim of this M.Sc. thesis is to investigate the production of thermostable glucose isomerase (GI; EC 5.3.1.5) by metabolically engineered sucrose-utilizing Escherichia coli in the designed molasses-based production media. Throughout the experiments the cell growth, sucrose consumption, recombinant GI activity, and by-product concentrations were analyzed. For this purpose, in the first part of this thesis, pRSETA plasmid carrying the thermostable GI encoding gene from Thermus thermophilus (xylA) was isola...
The Firewall paradox
Dündar, Furkan Semih; Tekin, Bayram; Department of Physics (2014)
In this MSc. thesis, we have attempted to give an overview of the firewall paradox and various approaches towards its resolution. After an introductory chapter on some basic concepts in quantum field theory in curved spacetimes such as Hawking radiation, we introduce the paradox. It arises out of application of principles each of which is thought or assumed to be correct: 1) unitary black hole evaporation, 2) validity of quantum field theory in curved spacetime, 3) a measure of the number of black hole quan...
Recombinant human growth hormone production under double promoters by Pichia pastoris
Yalçınkaya, Duygu; Çalık, Pınar; Özdamar, Tunçer H.; Department of Chemical Engineering (2017)
The aim of the M.Sc. thesis is expression of recombinant human growth hormone (rhGH) by Pichia pastoris under the double-promoters, namely, glyceraldehyde-3-phosphate dehydrogenase and pyruvate decarboxylase, engineered and constructed by metabolic- and genetic- engineering methods. The DNA fragment including the promoter region of the P. pastoris pyruvate decarboxylase (PPDC), Saccharomyces cerevisiae α-mating factor (α-MF1) secretion signal sequence, and hGH gene, was amplified from the pPDCZαA::hGH plasm...
Comparison of advanced modulation schemes for LEO satellite downlink communications
Belce, O (2003-11-22)
The M.Sc. degree project, whose one major part is explained in this paper, has been accomplished at the University of Surrey by the financial support of TUBITAK-BILTEN inclusive to the remote sensing satellite project BILSAT-1*, which was carried out by Surrey Satellite Technology Limited in UK, collaboration with TUBITAK-BILTEN. This paper explains the methodology and the simulation results of the performances of advanced modulation techniques under the implications of highly dynamic LEO satellite downlink...
Transcriptional engineering of pichia pastoris alcohol dehydrogenase 2 and alcohol oxidase 1 promoters for recombinant protein production
Gündüz Ergün, Burcu; Çalık, Pınar; Mattanovich, Diethard; Department of Biotechnology (2018)
The aim of the Ph.D. thesis was designing novel engineered promoter variants (NEPVs) to obtain strong ethanol regulated promoters for improved recombinant protein (r-protein) production, and to clarify the role of certain transcription factors (TFs) on the regulation of P. pastoris PADH2 and PAOX1. Promoter architecture of PADH2 was redesigned by nucleosome optimization and modification of transcription factor binding sites and, the induction mechanism of PAOX1 was changed to ethanol as sole carbon and ener...
Citation Formats
IEEE
ACM
APA
CHICAGO
MLA
BibTeX
S. Yaman, “A Comparative study for the production of recombinant intracellular glucose isomerase by escherichia coli and pichia pastoris,” M.S. - Master of Science, Middle East Technical University, 2014.