The phylogenetic relationship between populations of marginally and sympatrically located Pinus halepensis Mill. and Pinus brutia Ten. in Turkey, based on the ITS-2 region

Date

2009-01-01

Author

Tozkar, C. Ozge
Önde, Sertaç
Kaya, Zeki

Metadata

Show full item record

This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.

Item Usage Stats

155
views

0
downloads

Turkish red pine (Pinus brutia) is a widespread and important forest tree species in Turkey, occurring mainly in southern, western, and northwestern Turkey, while the natural occurrence of Aleppo pine (Pinus halepensis) is restricted to 2 locations and is found sympatrically with Turkish red pine. In the present study sympatric populations of both species from Mugla and Adana provinces in Turkey were sampled, and the internal transcribed spacer 2 (ITS-2) region of ribosomal DNA was comparatively studied with sequence analysis. Analysis of molecular variance (AMOVA) demonstrated 100% of total molecular variation between the species in Mugla province, versus only 50.65% in Adana province. Construction of a phylogenetic tree with a bootstrap value of 92% revealed that Aleppo pine and Turkish red pine samples at the species level were well separated. Estimated F, values indicated that Turkish red pine and Aleppo pine were highly differentiated in Mugla province due to possible reproductive isolation, while the 2 species shared a more common genetic background due to possible natural hybridization in Adana province.

Subject Keywords

Molecular diversity, Genetic differentiation, Phylogeny, Phylogeny, TS region, Aleppo pine, Turkish red pine

URI

https://hdl.handle.net/11511/42861

Journal

TURKISH JOURNAL OF AGRICULTURE AND FORESTRY

DOI

https://doi.org/10.3906/tar-0811-26

Collections

Department of Biology, Article

Suggestions

OpenMETU
Core

Comparative sequence analysis of the internal transcribed spacer 2 region of Turkish red pine (pinus brutia ten.) and natural aleppo pine (pinus halepensis mill.) populations from Turkey Tozkar, C. Özge; Kaya, Zeki; Department of Biology (2007) Turkish red pine (Pinus brutia) is wide-spread and an important forest tree species in Turkey, occurring mainly in southern, western and north-western Turkey and as small isolated populations in the Black Sea region. Aleppo pine (Pinus halepensis) has naturally found only in Adana and Muğla provinces as small population in mixture with Turkish red pine. Although Turkish red pine and Aleppo pine are morphologically different, Turkish red pine has been regarded as subspecies of Aleppo pine by some taxonomists...
The pattern of genetic variation in shoot growth of Pinus brutia Ten. populations sampled from the Toros mountains in Turkey Kaya, Zeki (1997-01-01) The pattern of genetic variation in shoot growth of Turkish red pine (Pinus brutia TEN.) was studied in 180 open-pollinated families from a south to north transect in southern Turkey. Seedlings from 1 coastal, 1 inland and 2 centrally located populations (45 open-pollinated families each) were grown for 2 growing seasons in a forest nursery located near Antalya. The study revealed that both populations and families within populations varied significantly in all seedling traits except for free growth in the ...
Genetic variation in Turkish red pine (Pinus brutia Ten.) seed stands as determined by RAPD markers Kandedmir, GE; Kandemir, I; Kaya, Zeki (2004-01-01) Turkish red pine (Pinus brutia Ten.) is one of the important tree species in Turkey. The species has been heavily disturbed by anthropogenic factors and fire, making it important to understand the magnitude of the impact on genetic diversity of areas reserved for seed production. To explore the extent of genetic variation in Turkish red pine seed stands, a random amplified polymorphic DNA (RAPD) marker system was used in the study. The estimated genic diversity for seed stands was found to range from H=0.17...
The evolutionary divergence of Pinus nigra subsp pallasiana and its varieties based on noncoding trn regions of chloroplast genome Gulsoy, Aysun Demet; Gulsoy, Ali Murat; Cengel, Burcu; Kaya, Zeki (2014-01-01) The Anatolian black pine [Pinus nigra Arnold subsp. pallasiana (Lamb.) Holmboe var. pallasiana] is one of the subspecies of European black pine, growing naturally as a widespread mid-elevation species in the southern, western, and northern Anatolian Mountains of Turkey. Three well-recognized varieties [var. pallasiana, var. fastigiata Businsky with pyramidal form, and var. seneriana (Saatcioglu) Yalt. with globular-shaped crown with multiple stems] occur naturally, but the studies on them are very limited. ...
Genetic Variation in Cold Hardiness and Phenology Between and Within Turkish Red Pine (Pinus brutia Ten.) Populations: Implications for Seed Transfer Kandemir, Gaye; Kaya, Zeki; TEMEL, FATİH; Önde, Sertaç (2010-01-01) Wind-pollinated seeds from 40 trees (half-sib families) were collected from each of six Turkish red pine (Pinus brutia Ten.) populations in southern Turkey. Two-year old seedlings were evaluated for growth, phenology and cold resistance in a common garden experiment established in Ankara, located outside the species' natural range. Each family was represented with a six-tree row plot within each of the three replications. The below freezing temperatures (-15.2 degrees C) observed in January and February of ...

Citation Formats

C. O. Tozkar, S. Önde, and Z. Kaya, “The phylogenetic relationship between populations of marginally and sympatrically located Pinus halepensis Mill. and Pinus brutia Ten. in Turkey, based on the ITS-2 region,” TURKISH JOURNAL OF AGRICULTURE AND FORESTRY, pp. 363–373, 2009, Accessed: 00, 2020. [Online]. Available: https://hdl.handle.net/11511/42861.