Genetic diversity and structure of Populus nigra populations in two highly fragmented river ecosystems from Turkey

2019-08-01
European black poplar (Populus nigra L.) is an important tree species in terms of social, economic, and ecological interest in Turkey. Although large poplar plantations meet the needs of the economy, natural genetic resources of the species have been highly degraded due to anthropogenic effects such as overexploitation and habitat fragmentations. To assess genetic diversity and structure of fragmented populations, 124 naturally distributed European black poplar trees from two major rivers (Kızılırmak and Göksu) in Turkey were sampled and screened by using 20 nuclear microsatellite DNA loci. To detect the possibility of natural hybridization, 10 reference Populus deltoids L. trees were studied with six microsatellite loci. Out of 124, five trees were determined as F2 hybrids with diagnostic and informative alleles. Studied populations appear to have experienced a recent bottleneck event which is likely to cause to reduction in allelic diversity and to increase heterozygosity (mean Ho = 0.80). Four populations representing upstream, middle and downstream parts of the Kızılırmak River were found to be differentiated from Göksu river population, evidenced by genetic differentiation (FST = 0.06), geographical distances in principal coordinate analysis and clustering pattern in structure analysis. Traditional management of European black poplar coupled with bottleneck and hybridization events has played an important role in reduced genetic diversity and degradation of the genetic resources of the species in two river systems. The study has provided invaluable information to prevent further genetic degradation, to maintain existing genetic diversity of the species in its natural habitats, and to implement efficient conservation strategies and breeding programs for future generations
Tree Genetics and Genomes

Suggestions

Genetic diversity pattern in Populus Nigra populations of two major river systems in Turkey
Çiftçi, Asiy; Kaya, Zeki; Department of Biology (2019)
European black poplar (Populus nigra L.) is an important tree species in terms of social, economic and ecological interest in Turkey. Although, poplar plantations in large areas meet the needs of the economy, the natural genetic resources of the species have been highly degraded due to anthropogenic effects and natural biological events. To assess genetic diversity structure of natural populations, 124 naturally distributed European black poplar trees from two major rivers (Kızılırmak and Göksu) in Turkey w...
Consequences of habitat fragmentation on genetic diversity and structure of Salix alba L. populations in two major river systems of Turkey
Degirmenci, Funda O.; Acar, Pelin; Kaya, Zeki (Springer Science and Business Media LLC, 2019-08-01)
Salix alba L. (white willow) is an indicator species of a healthy riparian ecosystem with great renewable energy potential in Turkey though habitats of the species in many river ecosystems are highly degraded or fragmented. Impacts of this degradation of river ecosystems on the magnitude and pattern of genetic diversity are not known. This study was aimed at assessing the genetic structure of S. alba populations in two highly degraded and fragmented river systems (the Goksu and Kzlrmak rivers) in Turkey wit...
Genetic differentiation between clone collections and natural populations of European black poplar (Populus nigra L.) in turkey
Çiftçi, Asiye; Kucukosmanoglu, Filiz; Karahan, Alptekin; Kaya, Zeki (2017-06-01)
The European black poplar (Populus nigra L.) is an ecologically and economically important tree species for Turkey. The important and major genetic resources of species for future breeding and ex situ conservation purposes have been archived in a clone bank in Ankara by selecting clones from natural populations and old plantations throughout Turkey. There is no study to date assessing genetic composition these materials. Two-hundred-thirty-three P. nigra clones from six geographic region of Turkey (clone co...
Genetic differentiation of Liquidambar Orientalis Mill. varieties with respect to matK region of chloroplast genome
Özdilek, Aslı; Kaya, Zeki; Department of Biology (2007)
Liquidambar L. genus is represented with mainly 4 species in the world and one of these species, Turkish sweet gum (Liquidambar orientalis Mill.) which is a relictendemic species is naturally found in only southwestern Turkey, mainly in Muğla Province. The limited distribution of species with two disputed varieties (var. integriloba Fiori and var. orientalis) and increased anthropogenic threats to its genetic resources signify the importance of studying genetic diversity in the species to have better conser...
Genetic relationships among perennial and annual Cicer species growing in Turkey as revealed by allozymes
Sudupak, MA; Kence, Aykut (Springer Science and Business Media LLC, 2004-05-01)
Allozyme polymorphisms were used to assess genetic variation and relationships among ten Cicer species ( annuals and perennials) growing in Turkey. Using seven enzyme systems, 12 putative scorable loci were detected and surveyed for polymorphism in an accession collection including wild and cultivated forms. Variation was generally low within accessions and species, but common between species. Cluster analysis based on the pairwise genetic distance coefficients (Nei 1978) among accessions and species using ...
Citation Formats
A. Çiftçi and Z. Kaya, “Genetic diversity and structure of Populus nigra populations in two highly fragmented river ecosystems from Turkey,” Tree Genetics and Genomes, pp. 0–0, 2019, Accessed: 00, 2020. [Online]. Available: https://hdl.handle.net/11511/36799.