Graduate School of Informatics, Article

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Recent Submissions

Defining a master curve of abdominal aortic aneurysm growth and its potential utility of clinical management
Akkoyun, Emrah; Gharahi, Hamidreza; Kwon, Sebastian T.; Zambrano, Byron A.; Rao, Akshay; Acar, Aybar Can; Lee, Whal; Baek, Seungik (2021-09-01)
© 2021 Elsevier B.V.Objective: The maximum diameter measurement of an abdominal aortic aneurysm (AAA), which depends on orthogonal and axial cross-sections or maximally inscribed spheres within the AAA, plays a significant...
Automated Game Mechanics and Aesthetics Generation Using Neural Style Transfer in 2D Video Games
Şen, Deniz; Küçükkaykı, Hasan Tahsin; Sürer, Elif (2021-07-01)
Human inbreeding has decreased in time through the Holocene
Ceballos, Francisco C.; Gürün, Kanat; Altınışık, Nefize Ezgi; Gemici, Hasan Can; Karamurat, Cansu; Koptekin, Dilek; Vural, Kıvılcım Başak; Mapelli, Igor; Sağlıcan, Ekin; Sürer, Elif; Erdal, Yılmaz Selim; Götherström, Anders; Özer, Füsun; Atakuman, Çiğdem; Somel, Mehmet (2021-07-01)
Data-driven manufacturing: An assessment model for data science maturity
Gökalp, Mert Onuralp; Gökalp, Ebru; KAYABAY, KEREM; Koçyiğit, Altan; Eren, Pekin Erhan (2021-07-01)
© 2021 The Society of Manufacturing EngineersToday, data science presents immense opportunities by turning raw data into manufacturing intelligence in data-driven manufacturing that aims to improve operational efficiency a...
GPU accelerated 3DES encryption
Altınok, Kaan Furkan; Peker, Afşin; Tezcan, Cihangir; Temizel, Alptekin (2021-07-01)
Triple DES (3DES) is a NIST and ISO/IEC standard block cipher that is also used in some web browsers and several electronic payment applications. We propose an optimized bit-level parallelization of 3DES for GPU accelerate...
Playtesting: What is Beyond Personas
Ariyurek, Sinan; Sürer, Elif; Betin Can, Aysu (2021-07-01)
Playtesting is an essential step in the game design process. Game designers use the feedback from playtests to refine their design. Game designers may employ procedural personas to automate the playtesting process. In this...
Epitranscriptomics of ischemic heart disease-the IHD-EPITRAN study design and objectives
Sikorski, Vilbert; et. al. (2021-06-02)
© 2021 by the authors. Licensee MDPI, Basel, Switzerland.Epitranscriptomic modifications in RNA can dramatically alter the way our genetic code is deciphered. Cells utilize these modifications not only to maintain physiolo...
Towards Development of a Model for Acceptance of Software Process Improvement Models in SMEs: Preliminary Findings
Durmuş, Suna; Özkan Yıldırım, Sevgi; Özcan Top, Özden (2021-06-01)
The software industry is playing a significant role in development of economies all over the world. It is mainly made up of small and medium software enterprises (SMEs). These companies aim to benefit from Software Process...
Impaired inhibitory GABAergic synaptic transmission and transcription studied in single neurons by Patch-seq in Huntington's disease
Paraskevopoulou, Foteini; Parvizi, Poorya; Senger, Gokce; Tunçbağ, Nurcan; Rosenmund, Christian; Yildirim, Ferah (2021-05-11)
© 2021 National Academy of Sciences. All rights reserved.Transcriptional dysregulation in Huntington's disease (HD) causes functional deficits in striatal neurons. Here, we performed Patchsequencing (Patch-seq) in an in vi...
Deep learning for detection and segmentation of artefact and disease instances in gastrointestinal endoscopy
Ali, Sharib; et. al. (2021-05-01)
© 2021 The AuthorsThe Endoscopy Computer Vision Challenge (EndoCV) is a crowd-sourcing initiative to address eminent problems in developing reliable computer aided detection and diagnosis endoscopy systems and suggest a pa...
Effectiveness of intubation devices in patients with cervical spine immobilisation: a systematic review and network meta-analysis
Singleton, Barry N.; Morris, Fiachra K.; Yet, Barbaros; Buggy, Donal J.; Perkins, Zane B. (2021-05-01)
Background: Cervical spine immobilisation increases the difficulty of tracheal intubation. Many intubation devices have been evaluated in this setting, but their relative performance remains uncertain.
Evaluation of Endoscopic Mayo Score with an Artificial Intelligence Algorithm
Kani, Haluk Tarık; Ergenç, İlkay; Polat, Görkem; Özen Alahdab, Yeşim; Temizel, Alptekin; Atuğ, Özlen (2021-05-01)
Developing Adaptive Serious Games for the Training of Children with Specific Learning Difficulties: A Two-Phase Usability and Technology Acceptance Study with Children and their Educators
Yildirim, Oguzcan; Sürer, Elif (2021-05-01)
Induction of Apoptosis in Hepatocellular Carcinoma Cell Lines by Novel Indolylacrylamide Derivatives: Synthesis and Biological Evaluation
Hawash, Mohammed; Kahraman, Deniz Cansen; Cetin-Atalay, Rengul; BAYTAŞ, SULTAN (2021-04-01)
Hepatocellular carcinoma (HCC) is the most prevalent primary liver cancer and one of the leading causes of cancer associated death worldwide. This is due to the highly resistant nature of this malignancy and the lack of ef...
The overexpression of DNA repair genes in invasive ductal and lobular breast carcinomas: Insights on individual variations and precision medicine
Mohamed, Ruwaa; Bargal, Salma A.; Mekawy, Asmaa S.; El-Shiekh, Iman; Tunçbağ, Nurcan; Ahmed, Alaa S.; Badr, Eman; Elserafy, Menattallah (2021-03-01)
In the era of precision medicine, analyzing the transcriptomic profile of patients is essential to tailor the appropriate therapy. In this study, we explored transcriptional differences between two invasive breast cancer s...
Neural correlates of metacontrast masking across different contrast polarities
Aydın, Alaz; Ogmen, Haluk; Kafaligonul, Hulusi (2021-03-01)
Metacontrast masking is a powerful illusion to investigate the dynamics of perceptual processing and to control conscious visual perception. However, the neural mechanisms underlying this fundamental investigative tool are...
Multi-year vector dynamic time warping-based crop mapping
Teke, Mustafa; Çetin, Yasemin (2021-03-01)
Recent automated crop mapping via supervised learning-based methods have demonstrated unprecedented improvement over classical techniques. Classification accuracies of these methods degrade considerably in cross-year mappi...
Diffusion Tensor Imaging Group Analysis Using Tract Profiling and Directional Statistics
Metin, Mehmet Ozer; Gökçay, Didem (2021-03-01)
Group analysis in diffusion tensor imaging is challenging. Comparisons of tensor morphology across groups have typically been performed on scalar measures of diffusivity, such as fractional anisotropy (FA), disregarding th...
Behavior and usability analysis for multimodal user interfaces
Dibeklioğlu, Hamdi; Sürer, Elif; Salah, Albert Ali; Dutoit, Thierry (2021-03-01)
ClickbaitTR: Dataset for Clickbait Detection from Turkish News Sites and Social Media with a Comparative Analysis via Machine Learning Algorithms
Genç, Şura; Sürer, Elif (2021-03-01)
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