Türkiye’den 12 Yerli, Karagül, Karacabey Merinosu ve Anadolu Yaban Koyununda (Ovis gmelinii anatolica) Y-Kromozom Polimorfizmleri

2018
PARMAKSIZ, Arif
OYMAK, Ahmet
YÜNCÜ, Eren
DEMİRCİ, Sevgin
KOBAN BAŞTANLAR, Evren
ÖZKAN ÜNAL, Emel
TOGAN, İnci
ÖZER, Füsun
Show full item record
Creative Commons License
This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
154
views
141
downloads
In this study, 182 male animals from 12 native sheep breeds, as well as Karacabey Merino and Karagül breeds of Anatolia, wild sheep Anatolian Mouflon (Ovis gmelinii anatolica) were used as the study material. Based on SRY and SRYM18 regions on the Y-chromosome, haplotypes of the populations were analyzed using DNA sequence analyses. The SRY region, A-oY1 allele was observed in all of the individuals studied. On the other hand, four different alleles corresponding to four Y-chromosome haplotypes were detected at the SRYM18 microsatellite region. Among native Anatolian breeds (n=143), H6 haplotype (80.41%), H4 haplotype (9.09%), H8 haplotype (8.40%) and H12 haplotype (2.1%) were identified. H6 haplotype was observed in all 16 individuals of Ovis gmelinii anatolica. Pairwise FST values based on haplotype frequencies were calculated for domestic sheep, and the highest FST value was observed between Karagül and Kıvırcık along with Karagül and Ovis gmelinii anatolica with pairwise FST value of 0.43202 (P<0.01). Y chromosome polymorphism of sheep from Turkey were examined comparatively with the accumulated data in the literature. Out of seven haplotypes (H4, H5, H6, H7, H8, H12, H19) observed in Europe and Asia, 4 haplotypes (H4, H6, H8 and H12) were observed in Anatolia. H12 was a private haplotype of Sakız, H6 seems to be the predominant haplotype of domestic sheep (79.51%) as well as being the only haplotype observed in Ovis gmelini anatolica. H4 haplotype seemed to be associated with fat tailed sheep migrating to Turkey, entering from south east of Turkey, which may be related with the arrival of nomadic Turks
General Veterinary, Y-Chromosome haplotypes, SRY, SRYM18, Ovis gmelinii anatolica, Native sheep breeds of Turkey
https://hdl.handle.net/11511/51492
Kafkas Universitesi Veteriner Fakultesi Dergisi
Department of Biology, Article

Suggestions

MTDNA based genetic diversity of native sheep breeds and Anatolian mouflon (Ovis Gmelini Anatolica)
Demirci, Sevgin; Togan, İnci Zehra; Department of Bioinformatics (2012)
In the present study, history of domestic sheep were investigated by mitochondrial DNA (mtDNA) based haplogroups (HPG) of 628 samples and mtDNA control region (CR) sequences of 240 samples from 13 Turkish sheep breeds which were located in the hearth of the first domestication center. Also, 30 Anatolian wild sheep (Ovis gmelinii anatolica) mtDNA CR sequences were obtained to contribute to the scenarios on initial domestication stages of sheep. Haplogroup compositions of breeds were identified with SSCP meth...
Genetic diversity of sheep breeds focusing on conservation research in turkey
Açan, Sinan Can; Togan, İnci Zehra; Öktem, Hüseyin Avni; Department of Biology (2012)
In the first part of the present study, samples of 13 native Turkish sheep breeds (n=628) were examined, individually and comparatively, with respect to their 19 microsatellite loci to characterize them by employing various statistical analyses. Low FST values, high mean number of alleles and allelic richness as well as results of Factorial Correspondence Analysis and Structure analyses showed the degree of admixture between native sheep breeds of Turkey, IVE and SAK were observed as the most distincts of t...
Reassessment of genetic diversity in native turkish sheep breeds with large numbers of microsatellite markers and mitochondrial DNA (MTDNA)
Doğan, Şükrü Anıl; Togan, İnci Zehra; Department of Biology (2009)
In the present study, within and among breed genetic variability in seven native Turkish sheep breeds (Akkaraman, Dağlıç, Gökçeada, İvesi, Karayaka, Kıvırcık and Morkaraman) were analyzed based on 20 microsatellite loci. For the analysis, various statistical methods such as Neighbor-Net, Factorial Correspondence Analysis (FCA) and Structure were used. High level of genetic variability within the Turkish breeds was observed. Gene pools of the breeds were visualized and found that they are highly overlapping ...
Revealing the history of Anatolian sheep domestication by using retrovirus integrations
Ayanoğlu, İhsan Cihan; Togan, İnci Zehra; Department of Biology (2013)
In the present study, it was aimed to contribute to the understanding of evolutionary history of sheep by using endogenous Jaagsiekte sheep retrovirus (enJSRV) integrations in 220 samples from 11 Turkish sheep breeds (Karayaka, Dağlıç, Kıvırcık, Sakız, Akkaraman, İvesi, Norduz, Karagül, Hemşin, Gökçeada and Morkaraman) and also in 30 samples from Anatolian wild sheep (Ovis gmelinii anatolica). Retrotypes of individuals were determined based on enJSRV integrations. The genetic distances between breeds were c...
Yerli koyun ırklarında bulunan genetik çeşitlilik
Soysal, İhsan M.; Togan, İnci Zehra; Ünal, Özkan Emel; Baştanlar, Koban Evren; Ergüven, Ayşe; Altunok, Vahdettin(2004)
Bu çalışmada, Türk koyun ırklarında mevcut genetik çeşitlilik 5 mikrosatelit lokusu kullanılarak incelenmiştir. Devlet üretim çiftlikleri, üniversite üretim çiftlikleri ve yerel yetiştiricilerin elinde bulunan sürülerden yerli ve melez onbir Türk ırkı (Akkaraman, Morkaraman, Kıvırcık, İvesi, Dağlıç, Karayaka, Hemşin, Norduz, Kangal, Konya Merinosu, Türkgeldi) ile bireyleri Irak'tan getirilmiş yabancı bir ırkı (Hamdani) temsil eden toplam 423 birey bu çalışmada kullanılmıştır. Bazı ır...
Citation Formats
A. PARMAKSIZ et al., “Türkiye’den 12 Yerli, Karagül, Karacabey Merinosu ve Anadolu Yaban Koyununda (Ovis gmelinii anatolica) Y-Kromozom Polimorfizmleri,” Kafkas Universitesi Veteriner Fakultesi Dergisi, 2018, Accessed: 00, 2020. [Online]. Available: https://hdl.handle.net/11511/51492.
METU IIS - Integrated Information Service open@metu.edu.tr